BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H06LP1|AL426600
(845 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig885 876 0.0
3x_Contig1805 141 3e-33
3x_Contig1803 137 4e-32
3x_Contig1701 117 4e-26
3x_Contig1796 103 6e-22
3x_Contig1806 101 2e-21
>3x_Contig885
Length = 2781
Score = 876 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 404 ttatatatggataaattatagaaaagattaattataagtaattatgctaatgtactctta 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttatatatggataaattatagaaaagattaattataagtaattatgctaatgtactctta 361
Query: 464 aagttacttcccgattaaagtggcgggctagagatcccgcacaacaaaaaacttgtcaga 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagttacttcccgattaaagtggcgggctagagatcccgcacaacaaaaaacttgtcaga 421
Query: 524 taagttaacataaaaatctggacagaggtaaggtagaagatccggaatcagaggctaaga 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 taagttaacataaaaatctggacagaggtaaggtagaagatccggaatcagaggctaaga 481
Query: 584 tatagtattgttcatatatatctagatactaaatagccattattcaactcaacaatctct 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatagtattgttcatatatatctagatactaaatagccattattcaactcaacaatctct 541
Query: 644 atgtttaaaaaactcatgagcgcatcatgtagtagcgagtgctcttcttaactatttcac 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgtttaaaaaactcatgagcgcatcatgtagtagcgagtgctcttcttaactatttcac 601
Query: 704 aaaaaaatgtctcgaagtaaatacaagtttaggactagcagatgcgaattctacccaaat 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaaaaaatgtctcgaagtaaatacaagtttaggactagcagatgcgaattctacccaaat 661
Query: 764 cctacttcctacatgtgcaaatagaacctgaacaatcgcaagcacatgtggtagatctcg 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctacttcctacatgtgcaaatagaacctgaacaatcgcaagcacatgtggtagatctcg 721
Query: 824 aacagtcgcaggtacacaaggt 845
||||||||||||||||||||||
Sbjct: 722 aacagtcgcaggtacacaaggt 743
Score = 385 bits (194), Expect = e-106
Identities = 206/210 (98%)
Strand = Plus / Plus
Query: 183 aaatcaccacacccgctttagccttgaattcaattcaccttttttttttcagcttcataa 242
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 81 aaatccccacacccgctttagcattgaattcaattcaccttttttttttcagcttcataa 140
Query: 243 tcagcaatggttcaatgaatagcgtattaaggtttccggaatttgcacgggataatacta 302
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcaacaatggttcaatgaatagcgtattaaggtttccggaatttgcacgggataatacta 200
Query: 303 ggtgttatatccttaatcttatcaacattggctccagccttacagcctctattaaatgaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtgttatatccttaatcttatcaacattggctccagccttacagcctctattaaatgaa 260
Query: 363 tgaggcacggcccataattttcaagatagt 392
||||||||||||||| ||||||||||||||
Sbjct: 261 tgaggcacggcccatcattttcaagatagt 290
>3x_Contig1805
Length = 19369
Score = 141 bits (71), Expect = 3e-33
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 1 gatcctagttcctctcagcttcagcttcttatctagcattggttcaataactggcgtctt 60
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 88 gatcctagttcgtctcagcttcagattcttatctagcattggttcaataactggcgcctt 147
Query: 61 agaagtgctcgtacaactccagggaacaaca 91
|||||||||| |||||| |||||||||||||
Sbjct: 148 agaagtgctcctacaacgccagggaacaaca 178
>3x_Contig1803
Length = 52241
Score = 137 bits (69), Expect = 4e-32
Identities = 87/93 (93%)
Strand = Plus / Plus
Query: 1 gatcctagttcctctcagcttcagcttcttatctagcattggttcaataactggcgtctt 60
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 51516 gatcctagttcatcccagcttcagcttcttatttagcattggttcaataactggcgcctt 51575
Query: 61 agaagtgctcgtacaactccagggaacaacact 93
|||||||||| |||||| |||||||||||||||
Sbjct: 51576 agaagtgctcctacaacgccagggaacaacact 51608
>3x_Contig1701
Length = 10926
Score = 117 bits (59), Expect = 4e-26
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 1 gatcctagttcctctcagcttcagcttcttatctagcattggttcaataactggcgtctt 60
||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 5291 gatcctagttcgtctcagcttcagcttcttatttagcattgtttcaataactggcgcctt 5350
Query: 61 agaagtgctcgtacaactccagggaacaaca 91
|||| ||||| |||||| ||||| |||||||
Sbjct: 5351 agaactgctcctacaacgccaggtaacaaca 5381
>3x_Contig1796
Length = 24558
Score = 103 bits (52), Expect = 6e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 12 ctctcagcttcagcttcttatctagcattggttcaataactggcgtcttagaagtgctcg 71
||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||| |||||
Sbjct: 8717 ctctcagcttcagcttcttatttagcattagttcaataattggcgccttagaaatgctcc 8776
Query: 72 tacaactccagggaacaaca 91
|||||| |||||||||||||
Sbjct: 8777 tacaacgccagggaacaaca 8796
>3x_Contig1806
Length = 53694
Score = 101 bits (51), Expect = 2e-21
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 1 gatcctagttcctctcagcttcagcttcttatctagcattggttcaataactggcgtctt 60
|||| ||||| | |||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 41614 gatcatagttgcactcaacttcaacttcttatctagcattggttcaataactggcgcctt 41673
Query: 61 agaagtgctcgtacaactccagggaacaaca 91
|||| ||||| |||||| |||| ||||||||
Sbjct: 41674 agaaatgctcctacaacgccagagaacaaca 41704
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8269
Number of Sequences: 1807
Number of extensions: 8269
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 6
length of query: 845
length of database: 10,358,551
effective HSP length: 16
effective length of query: 829
effective length of database: 10,329,639
effective search space: 8563270731
effective search space used: 8563270731
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)